Lecture 02
DNA sequencing
Date: August 29, 2024
The session traces the evolution of DNA sequencing technologies, commencing with the seminal Sanger method and progressing to state-of-the-art Illumina and Nanopore platforms. Through a comparative analysis of these technologies, we will elucidate the rapid advancements that have catalyzed genomic research. The discourse will encompass a critical evaluation of the strengths and limitations inherent to each method, offering insights into their optimal applications in contemporary research contexts. The lecture culminates with an in-depth overview of a typical DNA sequencing workflow, providing students with a pragmatic understanding of genomic data generation.
Learning objectives¶
What you should be able to do after today's lecture:
- Analyze antibiotic resistance challenges and evaluate genomics' role in mitigating them.
- Construct a general workflow intrinsic to DNA sequencing experiments.
- Delineate the core principles underlying Sanger sequencing.
- Conduct a comparative analysis of Illumina sequencing vis-à-vis Sanger sequencing.
- Explicate the fundamental principles governing Nanopore sequencing technology.
Readings¶
Relevant content for today's lecture.
- Sequencing background
- DNA sequencing
- DNA sample preparation
- PCR
- Sanger sequencing
- Illumina sequencing
- Nanopore sequencing
Presentation¶
- View: slides.com/aalexmmaldonado/biosc1540-l02
- Live link: slides.com/d/wOV7d9w/live
- Download: biosc1540-l02.pdf